Changes for version 2.8
- Migrated to proserver.svn.sf.net Removed non-core modules (SourceAdaptors & Transports). Those previously distributed as part of the ProServer repository will still be available on cvs.sanger.ac.uk
- Added support for authentication, with two methods provided: IP address and remote HTTP authority.
- Added builtin support for Simple Interaction Format files.
- Added strict_boundaries config option to turn on Andy's new feature-is-within-bounds checks, retaining backwards-compatible behaviour.
Modules
authenticates DAS requests
authenticates DAS requests by issuing requests to a remote authority
authenticates DAS requests by IP address
configuration parsing and hooks
base class for sources
A ProServer transport module that works off any flat file that Bio::SeqIO supports.
Comma-separated-values transport layer
A DBI transport layer (actually customised for MySQL)
A generic transport layer for deriving others from
Pulls features over command-line SRS/getz transport
Oracle/DBI transport layer
A ProServer transport module for wgetz (SRS web access)
Builds simple DAS features from a database
A runtime factory for B::D::P::SourceAdaptors
A database-backed implementation of B::D::P::SourceHydra