NAME
Bio::Phylo::Matrices - Holds a set of matrix objects.
SYNOPSIS
use Bio::Phylo::Matrices;
use Bio::Phylo::Matrices::Matrix;
my $matrices = Bio::Phylo::Matrices->new;
my $matrix = Bio::Phylo::Matrices::Matrix->new;
$matrices->insert($matrix);DESCRIPTION
The Bio::Phylo::Matrices object models a set of matrices. It inherits from the Bio::Phylo::Listable object, and so the filtering methods of that object are available to apply to a set of matrices.
METHODS
CONSTRUCTOR
- new()
-
Type : Constructor Title : new Usage : my $matrices = Bio::Phylo::Matrices->new; Function: Initializes a Bio::Phylo::Matrices object. Returns : A Bio::Phylo::Matrices object. Args : None required.
SEE ALSO
- Bio::Phylo::Listable
-
The Bio::Phylo::Matrices object inherits from the Bio::Phylo::Listable object. Look there for more methods applicable to the matrices object.
- Bio::Phylo::Manual
-
Also see the manual: Bio::Phylo::Manual.
FORUM
CPAN hosts a discussion forum for Bio::Phylo. If you have trouble using this module the discussion forum is a good place to start posting questions (NOT bug reports, see below): http://www.cpanforum.com/dist/Bio-Phylo
BUGS
Please report any bugs or feature requests to bug-bio-phylo@rt.cpan.org, or through the web interface at http://rt.cpan.org/NoAuth/ReportBug.html?Queue=Bio-Phylo. I will be notified, and then you'll automatically be notified of progress on your bug as I make changes. Be sure to include the following in your request or comment, so that I know what version you're using:
$Id: Matrices.pm 3293 2007-03-17 17:12:43Z rvosa $
AUTHOR
Rutger Vos,
- email:
rvosa@sfu.ca - web page: http://www.sfu.ca/~rvosa/
ACKNOWLEDGEMENTS
The author would like to thank Jason Stajich for many ideas borrowed from BioPerl http://www.bioperl.org, and CIPRES http://www.phylo.org and FAB* http://www.sfu.ca/~fabstar for comments and requests.
COPYRIGHT & LICENSE
Copyright 2005 Rutger Vos, All Rights Reserved. This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself.