NAME

seq_length.pl - lists the number of bases and number of sequences in specified sequence database files

SYNOPSIS

seq_length.pl *.fa

DESCRIPTION

seq_length.pl will report the total number of residues and total number of individual sequences contained within a specified sequence database file.

OPTIONS

-f/--format          - Specify the database format ('fasta' is default).
                       This script uses SeqIO and as such formats are 
                       limited to those which SeqIO system supports.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

bioperl-l@bioperl.org                  - General discussion
http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

http://bugzilla.open-bio.org/

AUTHOR - Jason Stajich

Jason Stajich <jason@bioperl.org>

To install Bio::Seq, copy and paste the appropriate command in to your terminal.

cpanm

cpanm Bio::Seq

CPAN shell

perl -MCPAN -e shell
install Bio::Seq

For more information on module installation, please visit the detailed CPAN module installation guide.

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