Documentation
translate an alignment into NEXUS format using BioPerl
Trees as strings
PostScript plot of tree + data table (from NEXUS infile)
NEXUS file manipulation tool
Modules
A class representing a NEXUS object, which can be created from and written to a NEXUS file
parses and reads in the assumptions block of a NEXUS file
represents a Characters Block (Data or Characters) of a NEXUS file
represents a history block of a NEXUS file
provides a few functions for nodes
parses and reads NEXUS Sets block
parses and reads in the taxa block of a NEXUS file
provides a few functions for trees
parses and reads in the trees block of a NEXUS file
represents an unaligned block of a NEXUS file
simple block object for storing information about a block not recognized by the NEXUS package.