Changes for version 0.2.0 - 2018-04-24
- `egaz template`
- Add 7_multi_aligndb.sh
- Add 7_self_aligndb.sh
- Add 9_pack_up.sh
- Store anno.yml and chr_length.csv to Results/
- `egaz repeatmasker`
- Try hard to find rmOutToGFF3.pl
- `egaz prepseq`
- Simplify headers for sequences in directory
- `egaz masked`
- Handle unmasked sequences
Modules
Backend of Easy Genome Aligner
Provides
in lib/App/Egaz/Command/blastlink.pm
in lib/App/Egaz/Command/blastmatch.pm
in lib/App/Egaz/Command/blastn.pm
in lib/App/Egaz/Command/exactmatch.pm
in lib/App/Egaz/Command/fas2vcf.pm
in lib/App/Egaz/Command/formats.pm
in lib/App/Egaz/Command/lastz.pm
in lib/App/Egaz/Command/lav2axt.pm
in lib/App/Egaz/Command/lav2psl.pm
in lib/App/Egaz/Command/lpcnam.pm
in lib/App/Egaz/Command/masked.pm
in lib/App/Egaz/Command/maskfasta.pm
in lib/App/Egaz/Command/multiz.pm
in lib/App/Egaz/Command/normalize.pm
in lib/App/Egaz/Command/partition.pm
in lib/App/Egaz/Command/plottree.pm
in lib/App/Egaz/Command/prepseq.pm
in lib/App/Egaz/Command/raxml.pm
in lib/App/Egaz/Command/repeatmasker.pm
in lib/App/Egaz/Command/template.pm
in lib/App/Egaz/Common.pm