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App-Mimosa-0.02
River stage zero No dependents

Changes for version 0.02 - 2011-11-23

  • Greatly improved POD in App::Mimosa
  • Added POD to the deployment scripts
  • Improved UI so the advanced section does not obscure buttons

Documentation

app_mimosa_cgi.pl
Catalyst CGI
app_mimosa_create.pl
Create a new Catalyst Component
app_mimosa_fastcgi.pl
Catalyst FastCGI
app_mimosa_test.pl
Catalyst Test

Modules

App::Mimosa
Miniature Model Organism Sequence Aligner
App::Mimosa::Controller::Root
Mimosa Root Controller
App::Mimosa::Model::BCS
Catalyst DBIC Schema Model
App::Mimosa::Schema::BCS
DBIx::Class schema used by Mimosa. A subset of Chado.
App::Mimosa::Schema::BCS::Result::Mimosa::Job
Mimosa Job
App::Mimosa::Schema::BCS::Result::Mimosa::SequenceSet
a set of sequences (like a BLAST database)
App::Mimosa::Schema::BCS::Result::Mimosa::SequenceSetOrganism
linking table between Mimosa::SequenceSet and Organism::Organism.
App::Mimosa::View::Mason
Mason View Component

Provides

App::Mimosa::Aligner
in lib/App/Mimosa/Aligner.pm
App::Mimosa::Controller::Auth
in lib/App/Mimosa/Controller/Auth.pm
App::Mimosa::Controller::JSON
in lib/App/Mimosa/Controller/JSON.pm
App::Mimosa::Controller::Sequence
in lib/App/Mimosa/Controller/Sequence.pm
App::Mimosa::Database
in lib/App/Mimosa/Database.pm
App::Mimosa::Job
in lib/App/Mimosa/Job.pm
App::Mimosa::Util
in lib/App/Mimosa/Util.pm
App::Mimosa::View::SeqIO
in lib/App/Mimosa/View/SeqIO.pm

Examples

Other files