NAME
Bio::Chado::Schema::Result::Mimosa::SequenceSet - a set of sequences (like a BLAST database)
COLUMNS
mimosa_sequence_set_id
Auto-incrementing surrogate primary key.
shortname
Unique short name for referring to this set. For example, ITAG2.2_cdnas.
Not null, varchar(255).
sha1
SHA1 of the full FASTA of this sequence set. Nullable.
title
User-visible title of the sequence set.
Not null. Varchar(255).
description
Text description of the set, probably stored in Markdown or some similar format.
Nullable.
alphabet
Sequence type, either 'protein' or 'nucleotide'.
Not null. Varchar(20).
source_spec
Specially-formatted text representing how to fetch new copies of this sequence set.
This text will be interpreted by software for fetching new copies of sequence sets.
Nullable. Unlimited length.
lookup_spec
Specially-formatted text representing how to cross-reference identifiers in this database with other databases.
Nullable. Unlimited length.
info_url
URL pointing to a human-readable resource giving more information about this sequence set.
Nullable. Varchar(255).
update_interval
Desired interval between updates, in seconds. A NULL value means no automatic updating. Defaults to daily.
Nullable. Integer.
is_public
Whether this sequence set should be visible to all users.
Not nullable. Default false.
RELATIONS
sequence_set_organisms
Type: has_many
Related object: Bio::Chado::Schema::Result::Mimosa::SequenceSetOrganism