Proch-N50-1.7.0

Changes for version 1.7.0 - 2025-02-03

General code refactoring
Improved has_seqfu() handling when seqfu is not installed
Updated docs
Updated dist.ini with copyrights
Fixed bug in fu-grep (-n was attempting to reverse complement the string; invalid operation but output was fine)

Concatenate FASTA or FASTQ files

Find the common sequences between two files

A FASTA/FASTQ sequence counter

Get sequences by name (also using lists)

Extract sequences using patterns

Print sequence hashes

Filter FASTA/FASTQ files by sequence length

rename sequences

SeqFu testkit

Sort sequences by size

Dereplicate sequences and generate abundance information

n50

A script to calculate N50 from one or multiple FASTA/FASTQ files.

Calculate N50 and related statistics for FASTA/FASTQ files with minimal dependencies

SeqFu utilities

To install Proch::N50, copy and paste the appropriate command in to your terminal.

cpanm Proch::N50

perl -MCPAN -e shell
install Proch::N50

For more information on module installation, please visit the detailed CPAN module installation guide.

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