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Bio-MUST-Apps-FortyTwo-0.213470
River stage one • 1 direct dependent • 1 total dependent
/ Bio::MUST::Apps::FortyTwo

NAME

Bio::MUST::Apps::FortyTwo - Main class for forty-two tool

VERSION

version 0.213470

DESCRIPTION

This distribution includes our software FortyTwo (42). The aim of 42 is to add (and optionally align) sequences to a preexisting multiple sequence alignment while controlling for orthology relationships and potentially contaminating sequences. Sequences to add are either nucleotide transcripts resulting from transcriptome assembly or already translated protein sequences. One can also use genomic nucleotide sequences (because 42 can splice introns), but this possibility has not been extensively tested so far.

For information can be found in the FortyTwo::Manual.

AUTHOR

Denis BAURAIN <denis.baurain@uliege.be>

CONTRIBUTOR

Mick VAN VLIERBERGHE <mvanvlierberghe@doct.uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.